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SRM1 Ran guanyl-nucleotide exchange factor [ Saccharomyces cerevisiae S288C ]

Gene ID: 852782, updated on 9-Dec-2024

Summary

Official Symbol
SRM1
Official Full Name
Ran guanyl-nucleotide exchange factor
Primary source
SGD:S000003065
Locus tag
YGL097W
See related
AllianceGenome:SGD:S000003065; FungiDB:YGL097W; VEuPathDB:YGL097W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
MTR1; PRP20; TSM437
Summary
Enables guanyl-nucleotide exchange factor activity. Involved in nucleocytoplasmic transport and nucleus organization. Located in chromatin; cytoplasm; and nucleus. Orthologous to human RCC1 (regulator of chromosome condensation 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See SRM1 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (321782..323230)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene SNAP receptor USE1 Neighboring gene tRNA-His Neighboring gene Tos8p Neighboring gene tRNA-Glu

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 
enables guanyl-nucleotide exchange factor activity IGI
Inferred from Genetic Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in nucleus organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in poly(A)+ mRNA export from nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein import into nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of mitotic spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in ribosomal subunit export from nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Ran guanyl-nucleotide exchange factor
NP_011418.1
  • Nucleotide exchange factor for Gsp1p; localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p; human homolog of the RAN GEF, RCC1, can complement a temperature sensitive point mutant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    321782..323230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180962.1NP_011418.1  TPA: Ran guanyl-nucleotide exchange factor [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011418.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VU48, P21827
    UniProtKB/TrEMBL
    A6ZU83, B3LHG2, B5VIM9, C7GW22, C8Z8F1, G2WE02, N1P1U3
    Conserved Domains (1) summary
    COG5184
    Location:15477
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]