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PEP12 SNAP receptor PEP12 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854201, updated on 9-Dec-2024

Summary

Official Symbol
PEP12
Official Full Name
SNAP receptor PEP12
Primary source
SGD:S000005562
Locus tag
YOR036W
See related
AllianceGenome:SGD:S000005562; FungiDB:YOR036W; VEuPathDB:YOR036W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
VPL6; VPS6; VPT13
Summary
Enables SNAP receptor activity. Involved in macroautophagy; vacuolar transport; and vacuole inheritance. Located in Golgi apparatus and endosome. Orthologous to several human genes including STX12 (syntaxin 12). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See PEP12 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (400348..401214)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene She4p Neighboring gene oxidoreductase Neighboring gene Hir2p

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables SNAP receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables SNAP receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables SNAP receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables SNARE binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in Golgi to vacuole transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in Golgi to vacuole transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cytoplasm to vacuole targeting by the Cvt pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in macroautophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuole inheritance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vesicle docking IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle fusion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IMP
Inferred from Mutant Phenotype
more info
PubMed 
part_of SNARE complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endosome IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in fungal-type vacuole membrane HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
SNAP receptor PEP12
NP_014679.1
  • Target membrane receptor (t-SNARE); for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    400348..401214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183455.1NP_014679.1  TPA: SNAP receptor PEP12 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014679.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W2A3, P32854
    UniProtKB/TrEMBL
    A6ZNP1, B3LJ89, B5VRT8, C7GLG5, C8ZHZ8, G2WMR8, N1NVR1
    Conserved Domains (1) summary
    COG5325
    Location:4288
    COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]