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putative flavin adenine dinucleotide transporter [ Saccharomyces cerevisiae S288C ]

Gene ID: 854548, updated on 9-Dec-2024

Summary

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Official Full Name
putative flavin adenine dinucleotide transporter
Primary source
SGD:S000005892
Locus tag
YOR365C
See related
AllianceGenome:SGD:S000005892; FungiDB:YOR365C; VEuPathDB:YOR365C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in sphingolipid biosynthetic process. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (1023461..1025572, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene proteasome core particle subunit alpha 7 Neighboring gene oleate-activated transcription factor PIP2 Neighboring gene Scp1p Neighboring gene Rad17p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chemogenetic E-MAP in Saccharomyces cerevisiae for Identification of Membrane Transporters Operating Lipid Flip Flop. Vazquez HM, et al. PLoS Genet, 2016 Jul. PMID 27462707, Free PMC Article
  2. The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Dujon B, et al. Nature, 1997 May 29. PMID 9169874
  3. Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment. Shulist K, et al. Sci Rep, 2017 Sep 12. PMID 28900268, Free PMC Article
  4. The complete spectrum of yeast chromosome instability genes identifies candidate CIN cancer genes and functional roles for ASTRA complex components. Stirling PC, et al. PLoS Genet, 2011 Apr. PMID 21552543, Free PMC Article
  5. A systematic proximity ligation approach to studying protein-substrate specificity identifies the substrate spectrum of the Ssh1 translocon. Cohen N, et al. EMBO J, 2023 Jun 1. PMID 37073826, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in fungal-type cell wall biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sphingolipid biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative flavin adenine dinucleotide transporter
NP_015010.1
  • Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    1023461..1025572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183785.1 → NP_015010.1  TPA: putative flavin adenine dinucleotide transporter [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015010.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W359, Q08844
    UniProtKB/TrEMBL
    B3LK21, B5VSP1, C8ZHB3, N1NX28
    Conserved Domains (2) summary
    pfam06011
    Location:204 → 652
    TRP; Transient receptor potential (TRP) ion channel
    pfam14558
    Location:60 → 199
    TRP_N; ML-like domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08844.1

Gene LinkOut

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