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[ Saccharomyces cerevisiae S288C ]

Gene ID: 855058, updated on 9-Dec-2024

Summary

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Primary source
SGD:S000006568
Locus tag
YNCM0019W
See related
AllianceGenome:SGD:S000006568
Gene type
tRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables ribosome binding activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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Location:
chromosome: XIII
Sequence:
Chromosome: XIII; NC_001145.3 (352280..352370)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Yet2p Neighboring gene D-arabinose 1-dehydrogenase (NAD(P)(+)) ARA2 Neighboring gene Arg80p Neighboring gene transcription factor MCM1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nuclear magnetic resonance studies on yeast tRNAPhe. II. Assignment of the iminoproton resonances of the anticodon and T stem by means of nuclear Overhauser effect experiments at 500 MHz. Heerschap A, et al. Nucleic Acids Res, 1983 Jul 11. PMID 6346268, Free PMC Article
  2. Global flexibility of tertiary structure in RNA: yeast tRNAPhe as a model system. Friederich MW, et al. Proc Natl Acad Sci U S A, 1998 Mar 31. PMID 9520407, Free PMC Article
  3. Studies of yeast phenylalanine-accepting transfer ribonucleic acid backbone structure in solution by phosphorus-31 nuclear magnetic resonance spectroscopy. Salemink PJ, et al. Biochemistry, 1979 Aug 7. PMID 383144
  4. Initial stages of the thermal unfolding of yeast phenylalanine transfer RNA as studied by chemical modification: the effect of magnesium. Rhodes D. Eur J Biochem, 1977 Nov 15. PMID 412674
  5. A structurally modified yeast tRNAPhe with six nucleotides in the anticodon loop lacks significant phenylalanine acceptance. Nishikawa K, et al. J Biol Chem, 1982 Sep 25. PMID 7050115

See all (45) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables ribosome binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables triplet codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

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