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[ Saccharomyces cerevisiae S288C ]

Gene ID: 855815, updated on 9-Dec-2024

Summary

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Primary source
SGD:S000006776
Locus tag
YNCP0001C
See related
AllianceGenome:SGD:S000006776
Gene type
tRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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Location:
chromosome: XVI
Sequence:
Chromosome: XVI; NC_001148.4 (56169..56274, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Neighboring gene gag protein Neighboring gene gag-pol fusion protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rational design of an orthogonal tryptophanyl nonsense suppressor tRNA. Hughes RA, et al. Nucleic Acids Res, 2010 Oct. PMID 20571084, Free PMC Article
  2. Anticodon bases C34 and C35 are major, positive, identity elements in Saccharomyces cerevisiae tRNA(Trp). Yesland KD, et al. Nucleic Acids Res, 1993 Nov 11. PMID 8255761, Free PMC Article
  3. tRNA genes and retroelements in the yeast genome. Hani J, et al. Nucleic Acids Res, 1998 Feb 1. PMID 9443958, Free PMC Article
  4. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. Percudani R, et al. J Mol Biol, 1997 May 2. PMID 9159473
  5. A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. Kumar Y, et al. BMC Genomics, 2013 Jun 17. PMID 23767421, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • Tryptophan tRNA (tRNA-Trp), predicted by tRNAscan-SE analysis

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables triplet codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

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