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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 856184, updated on 9-Dec-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000006275
Locus tag
YPR071W
See related
AllianceGenome:SGD:S000006275; FungiDB:YPR071W; VEuPathDB:YPR071W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cell periphery and endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (688172..688807)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene spermidine synthase Neighboring gene Med1p Neighboring gene tRNA-Ser Neighboring gene CCR4-NOT core subunit NOT5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Disruption of fungal cell wall by antifungal Echinacea extracts. Mir-Rashed N, et al. Med Mycol, 2010 Nov. PMID 20429770
  2. Topology models for 37 Saccharomyces cerevisiae membrane proteins based on C-terminal reporter fusions and predictions. Kim H, et al. J Biol Chem, 2003 Mar 21. PMID 12524434
  3. Variation in gene duplicates with low synonymous divergence in Saccharomyces cerevisiae relative to Caenorhabditis elegans. Katju V, et al. Genome Biol, 2009. PMID 19594930, Free PMC Article
  4. Recruitment of Rpd3 to the telomere depends on the protein arginine methyltransferase Hmt1. Milliman EJ, et al. PLoS One, 2012. PMID 22953000, Free PMC Article
  5. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_015396.1
  • Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    688172..688807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184168.1 → NP_015396.1  TPA: uncharacterized protein YPR071W [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015396.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W475, Q12346
    UniProtKB/TrEMBL
    B3LLC4, B5VTL8, C7GY55, N1NVK4
    Conserved Domains (1) summary
    pfam15701
    Location:29 → 196
    DUF4668; Domain of unknown function (DUF4668)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12346.1

Gene LinkOut

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