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PEX28 Pex28p [ Saccharomyces cerevisiae S288C ]

Gene ID: 856555, updated on 9-Dec-2024

Summary

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Official Symbol
PEX28
Official Full Name
Pex28p
Primary source
SGD:S000001193
Locus tag
YHR150W
See related
AllianceGenome:SGD:S000001193; FungiDB:YHR150W; VEuPathDB:YHR150W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in peroxisome organization. Located in peroxisomal membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See PEX28 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (397251..398990)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene snoRNA-binding rRNA-processing protein IMP3 Neighboring gene Skg6p Neighboring gene Mtc6p Neighboring gene Spo12p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YHR150w and YDR479c encode peroxisomal integral membrane proteins involved in the regulation of peroxisome number, size, and distribution in Saccharomyces cerevisiae. Vizeacoumar FJ, et al. J Cell Biol, 2003 Apr 28. PMID 12707309, Free PMC Article
  2. Pex30p, Pex31p, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae. Vizeacoumar FJ, et al. Mol Biol Cell, 2004 Feb. PMID 14617799, Free PMC Article
  3. Pex30-like proteins function as adaptors at distinct ER membrane contact sites. Ferreira JV, et al. J Cell Biol, 2021 Oct 4. PMID 34402813, Free PMC Article
  4. Peroxins Pex30 and Pex29 Dynamically Associate with Reticulons to Regulate Peroxisome Biogenesis from the Endoplasmic Reticulum. Mast FD, et al. J Biol Chem, 2016 Jul 22. PMID 27129769, Free PMC Article
  5. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in peroxisome organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in peroxisome organization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
  
involved_in peroxisome organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in peroxisomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in peroxisomal membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Pex28p
NP_012020.1
  • Peroxisomal integral membrane peroxin; involved in the regulation of peroxisomal size, number and distribution; genetic interactions suggest that Pex28p and Pex29p act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    397251..398990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179281.1 → NP_012020.1  TPA: Pex28p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012020.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DL99, P38848
    UniProtKB/TrEMBL
    A6ZT58, G2WFM3, N1P180
    Conserved Domains (1) summary
    pfam06398
    Location:201 → 569
    Pex24p; Integral peroxisomal membrane peroxin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38848.1

Gene LinkOut

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