U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPS4B ribosomal 40S subunit protein S4B [ Saccharomyces cerevisiae S288C ]

Gene ID: 856610, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
RPS4B
Official Full Name
ribosomal 40S subunit protein S4B
Primary source
SGD:S000001246
Locus tag
YHR203C
See related
AllianceGenome:SGD:S000001246; FungiDB:YHR203C; VEuPathDB:YHR203C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
A structural constituent of ribosome. Predicted to be involved in translation. Part of cytosolic small ribosomal subunit. Orthologous to human RPS4X (ribosomal protein S4 X-linked); RPS4Y1 (ribosomal protein S4 Y-linked 1); and RPS4Y2 (ribosomal protein S4 Y-linked 2). [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPS4B in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
2
Sequence:
Chromosome: VIII; NC_001140.6 (504476..505530, complement)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene exopolyphosphatase Neighboring gene Smn1p Neighboring gene alpha-1,2-mannosidase MNL1 Neighboring gene serine/threonine protein kinase SCH9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The yeast ribosomal protein S7 and its genes. Synetos D, et al. J Biol Chem, 1992 Feb 15. PMID 1737755
  2. Defining the protein complexome of translation termination factor eRF1: Identification of four novel eRF1-containing complexes that range from 20S to 57S in size. Denis CL, et al. Proteins, 2018 Feb. PMID 29139201, Free PMC Article
  3. Identification of a 57S translation complex containing closed-loop factors and the 60S ribosome subunit. Denis CL, et al. Sci Rep, 2018 Jul 31. PMID 30065356, Free PMC Article
  4. Characterization of the BUD31 gene of Saccharomyces cerevisiae. Masciadri B, et al. Biochem Biophys Res Commun, 2004 Aug 6. PMID 15303280
  5. Only a subset of the PAB1-mRNP proteome is present in mRNA translation complexes. Zhang C, et al. Protein Sci, 2014 Aug. PMID 24838188, Free PMC Article

See all (103) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of 90S preribosome HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
located_in intracellular membraneless organelle IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
ribosomal 40S subunit protein S4B
NP_012073.1
  • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S4, no bacterial homolog; RPS4B has a paralog, RPS4A, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    504476..505530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179334.1 → NP_012073.1  TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012073.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DLF2, P05753, P0CX35, P0CX36
    UniProtKB/TrEMBL
    A6ZQA2, B3LQM5, C8ZA04, G2WFS7, N1P4X8
    Conserved Domains (1) summary
    PLN00036
    Location:1 → 259
    PLN00036; 40S ribosomal protein S4; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CX35.1
P0CX36.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.