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BBIP1 BBSome interacting protein 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 8674100, updated on 9-Dec-2024

Summary

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Official Symbol
BBIP1provided by FlyBase
Official Full Name
BBSome interacting protein 1provided by FlyBase
Primary source
FLYBASE:FBgn0260237
Locus tag
Dmel_CG42511
See related
AllianceGenome:FB:FBgn0260237
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG42511; Dmel\CG42511
Summary
Predicted to be involved in cilium assembly and receptor localization to non-motile cilium. Predicted to be part of BBSome. Is expressed in adult head. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 18. Orthologous to human BBIP1 (BBSome interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See BBIP1 in Genome Data Viewer
Location:
85D15-85D15; 3-48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9404385..9407857)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5230107..5233579)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L34b Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene beta-Tubulin at 85D Neighboring gene TWIK-related acid-sensitive K[+] channel 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of modular intraflagellar transport from a coatomer-like progenitor. van Dam TJ, et al. Proc Natl Acad Sci U S A, 2013 Apr 23. PMID 23569277, Free PMC Article
  2. Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes. Takahashi H, et al. Sci Rep, 2020 Oct 1. PMID 33004976, Free PMC Article
  3. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in cilium assembly ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in receptor localization to non-motile cilium IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of BBSome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of BBSome IEA
Inferred from Electronic Annotation
more info
  
part_of BBSome ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
BBSome interacting protein 1
Names
BBIP1-PA
CG42511-PA
CPuORF of FBgn0037689

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9404385..9407857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001170097.2 → NP_001163568.1  BBSome interacting protein 1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163568.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JIG6
    Conserved Domains (1) summary
    pfam14777
    Location:17 → 54
    BBIP10; Cilia BBSome complex subunit 10
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1JIG6 E1JIG6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials