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rirA iron-responsive transcriptional regulator RirA [ Rhizobium rhizogenes ]

Gene ID: 86847363, updated on 13-Sep-2024

Summary

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Gene symbol
rirA
Gene description
iron-responsive transcriptional regulator RirA
Locus tag
F3X89_RS01480
Gene type
protein coding
Organism
Rhizobium rhizogenes (strain: LBA9402, nat-host: Rosa sp.)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Old locus tag
F3X89_01475
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Genomic context

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Location:
chromosome: 1

1 - NZ_CP044122.1Genomic Context describing neighboring genes Neighboring gene VOC family protein Neighboring gene YjgN family protein Neighboring gene M48 family metallopeptidase Neighboring gene ABC transporter substrate-binding protein Neighboring gene ABC transporter permease subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP044122.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation. Chao TC, et al. Appl Environ Microbiol, 2005 Oct. PMID 16204511, Free PMC Article
  2. RirA, an iron-responsive regulator in the symbiotic bacterium Rhizobium leguminosarum. Todd JD, et al. Microbiology (Reading), 2002 Dec. PMID 12480909
  3. The genome sequence of hairy root Rhizobium rhizogenes strain LBA9402: Bioinformatics analysis suggests the presence of a new opine system in the agropine Ri plasmid. Hooykaas MJG, et al. Microbiologyopen, 2021 Mar. PMID 33970547, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
iron-responsive transcriptional regulator RirA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP044122.1 Reference assembly

    Range
    307006..307494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_007700019.1 MULTISPECIES: iron-responsive transcriptional regulator RirA [Rhizobium]

    See identical proteins and their annotated locations for WP_007700019.1

    UniProtKB/TrEMBL
    A0A546Z6L9, A0AA87M2B8, A0AA87QAJ8, B9J9S4
Nucleotide Protein
Heading Accession and Version