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liuR liu genes regulator [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878723, updated on 14-Nov-2024

Summary

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Gene symbol
liuR
Gene description
liu genes regulator
Locus tag
PA2016
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (2206402..2206806, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit beta Neighboring gene isovaleryl-CoA dehydrogenase Neighboring gene hypothetical protein Neighboring gene multidrug efflux protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The expression of the genes involved in leucine catabolism of Pseudomonas aeruginosa is controlled by the transcriptional regulator LiuR and by the CbrAB/Crc system. Díaz-Pérez AL, et al. Res Microbiol, 2018 Jul-Aug. PMID 29787835
  2. Comparative genomics of regulation of fatty acid and branched-chain amino acid utilization in proteobacteria. Kazakov AE, et al. J Bacteriol, 2009 Jan. PMID 18820024, Free PMC Article
  3. The gnyRDBHAL cluster is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa. Díaz-Pérez AL, et al. Appl Environ Microbiol, 2004 Sep. PMID 15345388, Free PMC Article
  4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within isoprenoid catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of amino acid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
liu genes regulator
NP_250706.1
  • class 1: Function experimentally demonstrated in P. aeruginosa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    2206402..2206806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250706.1 liu genes regulator [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250706.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A367LZL8
    Conserved Domains (1) summary
    cd04776
    Location:5 → 123
    HTH_GnyR; Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR
Nucleotide Protein
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