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ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878914, updated on 24-Aug-2024

Summary

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Gene symbol
ribB
Gene description
3,4-dihydroxy-2-butanone-4-phosphate synthase
Locus tag
PA4054
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4534710..4535807, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene phosphatidylglycerophosphatase A Neighboring gene thiamine monophosphate kinase Neighboring gene transcription antitermination protein NusB Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene riboflavin synthase subunit alpha Neighboring gene riboflavin-specific deaminase/reductase Neighboring gene transcriptional regulator NrdR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Helicobacter pylori ribBA-mediated riboflavin production is involved in iron acquisition. Worst DJ, et al. J Bacteriol, 1998 Mar. PMID 9515916, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables riboflavin synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within reductive iron assimilation ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
3,4-dihydroxy-2-butanone-4-phosphate synthase
NP_252743.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4534710..4535807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252743.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252743.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HWX4
    Conserved Domains (1) summary
    PRK14019
    Location:1 → 365
    PRK14019; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HWX4.1

Gene LinkOut

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Molecular Biology Databases