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arnF 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 879133, updated on 11-Sep-2024

Summary

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Gene symbol
arnF
Gene description
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
Locus tag
PA3558
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (3986880..3987293)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase Neighboring gene bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase Neighboring gene 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD Neighboring gene 4-amino-4-deoxy-L-arabinose lipid A transferase Neighboring gene 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE Neighboring gene nucleotide sugar dehydrogenase Neighboring gene PTS system fructose-specific transporter subunit IIBC Neighboring gene 1-phosphofructokinase Neighboring gene PTS system fructose-specific transporter subunit FruI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An undecaprenyl phosphate-aminoarabinose flippase required for polymyxin resistance in Escherichia coli. Yan A, et al. J Biol Chem, 2007 Dec 7. PMID 17928292, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within beta-L-Ara4N-lipid A biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
NP_252248.1
  • 'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    3986880..3987293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252248.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252248.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HY59
    Conserved Domains (1) summary
    cl23754
    Location:4 → 128
    EamA; EamA-like transporter family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HY59.1

Gene LinkOut

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