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rne ribonuclease E [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880516, updated on 24-Aug-2024

Summary

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Gene symbol
rne
Gene description
ribonuclease E
Locus tag
PA2976
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (3332881..3336054)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene peptidase Neighboring gene hydrolase Neighboring gene ribosomal large subunit pseudouridine synthase C Neighboring gene UDP-N-acetylenolpyruvoylglucosamine reductase Neighboring gene phosphotyrosine protein phosphatase Neighboring gene 3-deoxy-manno-octulosonate cytidylyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease E
NP_251666.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    3332881..3336054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_251666.1 ribonuclease E [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_251666.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A9P1R6E0
    Conserved Domains (2) summary
    PRK10811
    Location:1 → 629
    rne; ribonuclease E; Reviewed
    PRK12323
    Location:848 → 1034
    PRK12323; DNA polymerase III subunit gamma/tau
Nucleotide Protein
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