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rpmB 50S ribosomal protein L28 [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880891, updated on 24-Aug-2024

Summary

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Gene symbol
rpmB
Gene description
50S ribosomal protein L28
Locus tag
PA5316
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5985883..5986119, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 50S ribosomal protein L33 Neighboring gene ncRNA Neighboring gene dipeptide ABC transporter substrate-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary structure of protein L28 from the large subunit of Escherichia coli ribosomes. Wittmann-Liebold B, et al. FEBS Lett, 1977 Sep 1. PMID 332524
  2. The roles of proteins L28 and L33 in the assembly and function of Escherichia coli ribosomes in vivo. Maguire BA, et al. Mol Microbiol, 1997 Jan. PMID 9044258
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within translation ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
part_of large ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
50S ribosomal protein L28
NP_254003.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5985883..5986119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_254003.1 50S ribosomal protein L28 [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_254003.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HTN8
    Conserved Domains (1) summary
    PRK00359
    Location:1 → 76
    rpmB; 50S ribosomal protein L28; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HTN8.1

Gene LinkOut

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Molecular Biology Databases
Research Materials