U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cobD cobalamin biosynthesis protein CobD [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881384, updated on 11-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
cobD
Gene description
cobalamin biosynthesis protein CobD
Locus tag
PA1275
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_002516.2 (1386323..1387261)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene cob(I)yrinic acid a,c-diamide adenosyltransferase Neighboring gene hydrogenobyrinate a,c-diamide synthase Neighboring gene 5,6-dimethylbenzimidazole synthase Neighboring gene threonine-phosphate decarboxylase Neighboring gene cobyric acid synthase Neighboring gene bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Neighboring gene nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA fragment containing five cob genes and identification of structural genes encoding S-adenosyl-L-methionine: uroporphyrinogen III methyltransferase and cobyrinic acid a,c-diamide synthase. Crouzet J, et al. J Bacteriol, 1990 Oct. PMID 2211520, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within cobalamin biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cobalamin biosynthesis protein CobD
NP_249966.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    1386323..1387261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_249966.1 cobalamin biosynthesis protein CobD [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_249966.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9I469
    Conserved Domains (1) summary
    PRK01209
    Location:1 → 291
    cobD; cobalamin biosynthesis protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9I469.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases