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vapC3 ribonuclease VapC3 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887534, updated on 6-Oct-2023

Summary

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Gene symbol
vapC3
Gene description
ribonuclease VapC3
Locus tag
Rv0549c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (640228..640641, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene oxidoreductase Neighboring gene 1,4-dihydroxy-2-naphthoyl-CoA synthase Neighboring gene antitoxin VapB3 Neighboring gene fatty-acid--CoA ligase FadD8 Neighboring gene hypothetical protein Neighboring gene muconate cycloisomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC3
NP_215063.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv0550c, contains PIN domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    640228..640641 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215063.1 ribonuclease VapC3 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215063.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H3LCL3
    Conserved Domains (1) summary
    COG4113
    Location:9 → 136
    COG4113; Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFB7.1

Gene LinkOut

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Molecular Biology Databases