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sigD ECF RNA polymerase sigma factor SigD [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887594, updated on 6-Jun-2024

Summary

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Gene symbol
sigD
Gene description
ECF RNA polymerase sigma factor SigD
Locus tag
Rv3414c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (3833038..3833676, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene inosine-5'-monophosphate dehydrogenase Neighboring gene hypothetical protein Neighboring gene anti-sigma-D factor RsdA Neighboring gene hypothetical protein Neighboring gene redox-responsive transcriptional regulator WhiB3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of σ-factor activity by proteolysis. Jaiswal RK, et al. Nucleic Acids Res, 2013 Mar 1. PMID 23314154, Free PMC Article
  2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Crystal structure of the Mycobacterium tuberculosis RsdA protein in complex with the -35 promoter region binding site.
    Title: Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of σ-factor activity by proteolysis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
ECF RNA polymerase sigma factor SigD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    3833038..3833676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217931.1 ECF RNA polymerase sigma factor SigD [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217931.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A655FFL6
    Conserved Domains (1) summary
    PRK09648
    Location:19 → 207
    PRK09648; RNA polymerase sigma factor ShbA
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WGG9.1

Gene LinkOut

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Molecular Biology Databases