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vapC8 ribonuclease VapC8 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 888149, updated on 6-Oct-2023

Summary

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Gene symbol
vapC8
Gene description
ribonuclease VapC8
Locus tag
Rv0665
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (758801..759139)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene ribonuclease VapC7 Neighboring gene antitoxin VapB7 Neighboring gene arylsulfatase AtsD Neighboring gene antitoxin VapB8 Neighboring gene membrane protein Neighboring gene DNA-directed RNA polymerase subunit beta Neighboring gene DNA-directed RNA polymerase subunit beta'

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC8
NP_215179.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv0664,contains PIN domain. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    758801..759139
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215179.1 ribonuclease VapC8 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215179.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4M4K1
    Conserved Domains (1) summary
    cl28905
    Location:10 → 108
    PIN_SF; PIN (PilT N terminus) domain: Superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFB1.1

Gene LinkOut

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Molecular Biology Databases