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TDE_RS13420 type II toxin-antitoxin system HicA family toxin [ Treponema denticola ATCC 35405 ]

Gene ID: 89920717, updated on 6-May-2024

Summary

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Gene symbol
TDE_RS13420
Gene description
type II toxin-antitoxin system HicA family toxin
Locus tag
TDE_RS13420
Gene type
protein coding
Organism
Treponema denticola ATCC 35405 (strain: ATCC 35405, type-material: type strain of Treponema denticola)
Lineage
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema
Old locus tag
TDE1378; TDE_1378
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Genomic context

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Sequence:
NC_002967.9 (1419900..1420046, complement)

NC_002967.9Genomic Context describing neighboring genes Neighboring gene pantetheine-phosphate adenylyltransferase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene YoaK family protein Neighboring gene DUF2764 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002967.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. HicA of Escherichia coli defines a novel family of translation-independent mRNA interferases in bacteria and archaea. Jørgensen MG, et al. J Bacteriol, 2009 Feb. PMID 19060138, Free PMC Article
  2. Regulation of growth and death in Escherichia coli by toxin-antitoxin systems. Yamaguchi Y, et al. Nat Rev Microbiol, 2011 Sep 19. PMID 21927020
  3. The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria. Makarova KS, et al. Bioinformatics, 2006 Nov 1. PMID 16895922
  4. Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Seshadri R, et al. Proc Natl Acad Sci U S A, 2004 Apr 13. PMID 15064399, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type II toxin-antitoxin system HicA family toxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002967.9 Reference assembly

    Range
    1419900..1420046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010956960.1 MULTISPECIES: type II toxin-antitoxin system HicA family toxin [Treponema]

    See identical proteins and their annotated locations for WP_010956960.1

    UniProtKB/TrEMBL
    Q73MX8
Nucleotide Protein
Heading Accession and Version