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DEHA2B16610g DEHA2B16610p [ Debaryomyces hansenii CBS767 ]

Gene ID: 8998271, updated on 17-May-2024

Summary

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Gene symbol
DEHA2B16610g
Gene description
DEHA2B16610p
Locus tag
DEHA2B16610g
See related
FungiDB:DEHA2B16610g; VEuPathDB:DEHA2B16610g
Gene type
protein coding
RNA name
DEHA2B16610p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2B16610g in Genome Data Viewer
Location:
chromosome: B
Exon count:
1
Sequence:
Chromosome: B; NC_006044.2 (1315024..1319550, complement)

Chromosome B - NC_006044.2Genomic Context describing neighboring genes Neighboring gene DEHA2B16566p Neighboring gene DEHA2B16588p Neighboring gene DEHA2B16632p Neighboring gene DEHA2B16654p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006044.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2B16610p
XP_002770140.1
  • similar to uniprot|P33302 Saccharomyces cerevisiae YOR153W PDR5 Short-lived membrane ABC (ATP-binding cassette) transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006044.2 Reference assembly

    Range
    1315024..1319550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002770094.1 → XP_002770140.1  DEHA2B16610p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_002770140.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5RSX2
    Conserved Domains (6) summary
    cd03232
    Location:864 → 1091
    ABCG_PDR_domain2; Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette transporters
    cd03233
    Location:165 → 393
    ABCG_PDR_domain1; First domain of the pleiotropic drug resistance-like subfamily G of ATP-binding cassette transporters
    TIGR00956
    Location:102 → 1499
    3a01205; Pleiotropic Drug Resistance (PDR) Family protein
    pfam01061
    Location:507 → 710
    ABC2_membrane; ABC-2 type transporter
    pfam06422
    Location:722 → 816
    PDR_CDR; CDR ABC transporter
    pfam14510
    Location:77 → 157
    ABC_trans_N; ABC-transporter extracellular N-terminal
Nucleotide Protein
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