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snoZ30 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 90824248, updated on 11-Sep-2024

Summary

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Official Symbol
snoZ30
Primary source
PomBase:SPSNORNA.25
Locus tag
SPOM_SPSNORNA.25
Gene type
ncRNA
RNA name
snoRNA
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mgU6-47
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Genomic context

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See snoZ30 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2044411..2044505)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase His7 Neighboring gene ubiquitin-protein ligase E3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL8 Neighboring gene ncRNA Neighboring gene Swr1 complex histone chaperone module subunit Vps71

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Schizosaccharomyces pombe mgU6-47 gene is required for 2'-O-methylation of U6 snRNA at A41. Zhou H, et al. Nucleic Acids Res, 2002 Feb 15. PMID 11842100, Free PMC Article
  2. The fission yeast methyl phosphate capping enzyme Bmc1 guides 2'-O-methylation of the U6 snRNA. Porat J, et al. Nucleic Acids Res, 2023 Sep 8. PMID 37403782, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables snRNA 2'-O-ribose methylation guide activity EXP
Inferred from Experiment
more info
 PubMed 
enables snRNA 2'-O-ribose methylation guide activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in U6 2'-O-snRNA methylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2044411..2044505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_197132.1 RNA Sequence

    Status: PROVISIONAL

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.