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yhbE inner membrane transporter [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 916095, updated on 6-Aug-2024

Summary

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Gene symbol
yhbE
Gene description
inner membrane transporter
Locus tag
ECs_4063
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (4074250..4075215, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene D-alanyl-D-alanine carboxypeptidase Neighboring gene GTPase involved in cell partitioning and DNA repair Neighboring gene 50S ribosomal subunit protein L27 Neighboring gene 50S ribosomal subunit protein L21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
inner membrane transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    4074250..4075215 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_312090.1 inner membrane transporter [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_312090.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2GK82, A0A8S7EEV8
    Conserved Domains (2) summary
    COG0697
    Location:1 → 304
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    pfam00892
    Location:6 → 143
    EamA; EamA-like transporter family
Nucleotide Protein
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