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ECs_3850 PagC-like membrane protein [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 916326, updated on 4-Feb-2024

Summary

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Gene symbol
ECs_3850
Gene description
PagC-like membrane protein
Locus tag
ECs_3850
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (3857956..3858489, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene transposase Neighboring gene transposase Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene T3SS secreted effector EspL

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
PagC-like membrane protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    3857956..3858489 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_311877.2 PagC-like membrane protein [Escherichia coli O157:H7 str. Sakai]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6WPL6
    Conserved Domains (1) summary
    cl21487
    Location:7 → 177
    OM_channels; Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20) ...
Nucleotide Protein
Heading Accession and Version

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