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SNR67 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164880, updated on 4-Jan-2025

Summary

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Official Symbol
SNR67
Primary source
SGD:S000006458
Locus tag
YNCE0002W
See related
AllianceGenome:SGD:S000006458
Gene type
ncRNA
RNA name
snoRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables rRNA 2'-O-ribose methylation guide activity. Involved in rRNA methylation. Located in cytoplasm. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See SNR67 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (61352..61433)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene H(+)-transporting V1 sector ATPase subunit D Neighboring gene mitochondrial 54S ribosomal protein RML2 Neighboring gene tRNA-Gly Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A systematic, ligation-based approach to study RNA modifications. Saikia M, et al. RNA, 2006 Nov. PMID 16963711, Free PMC Article
  2. RNA helicase-mediated regulation of snoRNP dynamics on pre-ribosomes and rRNA 2'-O-methylation. Aquino GRR, et al. Nucleic Acids Res, 2021 Apr 19. PMID 33721027, Free PMC Article
  3. Levels of sdRNAs in cytoplasm and their association with ribosomes are dependent upon stress conditions but independent from snoRNA expression. Mleczko AM, et al. Sci Rep, 2019 Dec 5. PMID 31804585, Free PMC Article
  4. Loss of Conserved rRNA Modifications in the Peptidyl Transferase Center Leads to Diminished Protein Synthesis and Cell Growth in Budding Yeast. Leppik M, et al. Int J Mol Sci, 2024 May 10. PMID 38791231, Free PMC Article
  5. Functional importance of individual rRNA 2'-O-ribose methylations revealed by high-resolution phenotyping. Esguerra J, et al. RNA, 2008 Apr. PMID 18256246, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • C/D box small nucleolar RNA (snoRNA); guides 2'-O-methylation of large subunit (LSU) rRNA at positions G2619 and U2724

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables rRNA 2'-O-ribose methylation guide activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables rRNA 2'-O-ribose methylation guide activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA methylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in rRNA methylation ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
part_of box C/D methylation guide snoRNP complex IC
Inferred by Curator
more info
 PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleolus IC
Inferred by Curator
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    61352..61433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132164.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Molecular Biology Databases
Research Materials