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SCR1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164887, updated on 9-Dec-2024

Summary

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Official Symbol
SCR1
Primary source
SGD:S000006491
Locus tag
YNCE0024W
See related
AllianceGenome:SGD:S000006491
Gene type
ncRNA
RNA name
SRP_RNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in SRP-dependent cotranslational protein targeting to membrane. Located in cytoplasm. Part of signal recognition particle, endoplasmic reticulum targeting. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See SCR1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (441987..442508)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene Gdi1p Neighboring gene uncharacterized protein Neighboring gene tRNA-Ile Neighboring gene gag-pol fusion protein Neighboring gene gag protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The most abundant small cytoplasmic RNA of Saccharomyces cerevisiae has an important function required for normal cell growth. Felici F, et al. Mol Cell Biol, 1989 Aug. PMID 2477683, Free PMC Article
  2. Intragenic promoter adaptation and facilitated RNA polymerase III recycling in the transcription of SCR1, the 7SL RNA gene of Saccharomyces cerevisiae. Dieci G, et al. J Biol Chem, 2002 Mar 1. PMID 11741971
  3. Distant segments of Saccharomyces cerevisiae scR1 RNA promote assembly and function of the signal recognition particle. van Nues RW, et al. J Mol Biol, 2007 May 4. PMID 17368481
  4. DNA watermarks in non-coding regulatory sequences. Heider D, et al. BMC Res Notes, 2009 Jul 7. PMID 19583865, Free PMC Article
  5. The signal recognition particle in S. cerevisiae. Hann BC, et al. Cell, 1991 Oct 4. PMID 1655273

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • RNA subunit of the Signal Recognition Particle (SRP)

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in SRP-dependent cotranslational protein targeting to membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to ER IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
part_of signal recognition particle, endoplasmic reticulum targeting IDA
Inferred from Direct Assay
more info
 PubMed 
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    441987..442508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132171.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Molecular Biology Databases
Research Materials