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SNR32 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164901, updated on 9-Dec-2024

Summary

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Official Symbol
SNR32
Primary source
SGD:S000007297
Locus tag
YNCH0012W
See related
AllianceGenome:SGD:S000007297
Gene type
ncRNA
RNA name
snoRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables rRNA pseudouridylation guide activity. Involved in snoRNA guided rRNA pseudouridine synthesis. Part of box H/ACA snoRNP complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See SNR32 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (381540..381727)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ribosomal 60S subunit protein L42B Neighboring gene Chs7p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SnR31, snR32, and snR33: three novel, non-essential snRNAs from Saccharomyces cerevisiae. Balakin AG, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265354, Free PMC Article
  2. The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae. Preti M, et al. Mol Cell, 2010 May 28. PMID 20513435
  3. Structure of H/ACA RNP protein Nhp2p reveals cis/trans isomerization of a conserved proline at the RNA and Nop10 binding interface. Koo BK, et al. J Mol Biol, 2011 Sep 2. PMID 21708174, Free PMC Article
  4. Bcd1p controls RNA loading of the core protein Nop58 during C/D box snoRNP biogenesis. Paul A, et al. RNA, 2019 Apr. PMID 30700579, Free PMC Article
  5. Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA. Ni J, et al. Cell, 1997 May 16. PMID 9160748

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • H/ACA box small nucleolar RNA (snoRNA); guides pseudouridylation of large subunit (LSU) rRNA at position U2191

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables rRNA pseudouridylation guide activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snoRNA guided rRNA pseudouridine synthesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of box H/ACA snoRNP complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in nucleolus IC
Inferred by Curator
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    381540..381727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132188.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Research Materials