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cobC alpha-ribazole phosphatase [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 917037, updated on 17-Dec-2024

Summary

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Gene symbol
cobC
Gene description
alpha-ribazole phosphatase
Locus tag
ECs_0676
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (750655..751266, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene 23S rRNA m(3)Psi1915 pseudouridine methyltransferase Neighboring gene ribosomal silencing factor Neighboring gene nicotinic acid mononucleotide adenylyltransferase Neighboring gene DNA polymerase III delta subunit Neighboring gene LPS assembly OM complex LptDE lipoprotein component

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
alpha-ribazole phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    750655..751266 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_308703.1 alpha-ribazole phosphatase [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_308703.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H2YWK9, A0A1X3J4T5, Q1RES3
    Conserved Domains (1) summary
    PRK15004
    Location:1 → 198
    PRK15004; adenosylcobalamin/alpha-ribazole phosphatase
Nucleotide Protein
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