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cas2 CRISPR-associated endonuclease Cas2 [ Ferroplasma acidarmanus Fer1 ]

Gene ID: 92355748, updated on 22-Oct-2024

Summary

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Gene symbol
cas2
Gene description
CRISPR-associated endonuclease Cas2
Locus tag
FACI_RS10450
Gene type
protein coding
Organism
Ferroplasma acidarmanus Fer1 (strain: Fer1, type-material: type strain of Ferroplasma acidarmanus)
Lineage
Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma
Old locus tag
FACI_IFERC00001G0002
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Genomic context

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Sequence:
NC_021592.1 (2439..2684, complement)

NC_021592.1Genomic Context describing neighboring genes Neighboring gene IS4-like element ISFac10 family transposase Neighboring gene type I-B CRISPR-associated endonuclease Cas1b Neighboring gene CRISPR-associated protein Cas4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021592.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein. Nam KH, et al. J Biol Chem, 2012 Oct 19. PMID 22942283, Free PMC Article
  2. A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats. Beloglazova N, et al. J Biol Chem, 2008 Jul 18. PMID 18482976, Free PMC Article
  3. Genome dynamics in a natural archaeal population. Allen EE, et al. Proc Natl Acad Sci U S A, 2007 Feb 6. PMID 17267615, Free PMC Article
  4. Identification of genes that are associated with DNA repeats in prokaryotes. Jansen R, et al. Mol Microbiol, 2002 Mar. PMID 11952905

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
CRISPR-associated endonuclease Cas2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_021592.1 Reference assembly

    Range
    2439..2684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_009886017.1 CRISPR-associated endonuclease Cas2 [Ferroplasma acidarmanus]

    See identical proteins and their annotated locations for WP_009886017.1

    UniProtKB/TrEMBL
    S0AMK4
Nucleotide Protein
Heading Accession and Version