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G6L97_RS16875 Lrp/AsnC family transcriptional regulator [ Agrobacterium tumefaciens ]

Gene ID: 92772887, updated on 10-Dec-2024

Summary

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Gene symbol
G6L97_RS16875
Gene description
Lrp/AsnC family transcriptional regulator
Locus tag
G6L97_RS16875
Gene type
protein coding
Organism
Agrobacterium tumefaciens (strain: G3/79, nat-host: willow)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
Old locus tag
G6L97_16875
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Genomic context

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Location:
chromosome: Linear

Linear - NZ_CP115842.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family protein Neighboring gene acetyl-CoA C-acyltransferase Neighboring gene isovaleryl-CoA dehydrogenase Neighboring gene carboxyl transferase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP115842.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pathogenicity, Phylogenetic relationship and NGS based identification and assembly of tumorigenic Agrobacterium radiabacter plasmidic and chromosomic reads isolated from Prunus duclcis. Nabi N, et al. Genomics, 2019 Dec. PMID 30287402
  2. The Lrp family of transcriptional regulators. Brinkman AB, et al. Mol Microbiol, 2003 Apr. PMID 12675791
  3. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Lrp/AsnC family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP115842.1 Reference assembly

    Range
    746968..747441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003500312.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Rhizobium/Agrobacterium group]

    See identical proteins and their annotated locations for WP_003500312.1

    UniProtKB/TrEMBL
    A0A0D8KHR2, A0A1B9TV49, A0A1S7N0U2, A0A1S7RPH4, A0A2W5HAA0, A0A822V8X6, A0AA42T095, A0AA86FY91, A0AA95AI58, A0AAE8IVD4
Nucleotide Protein
Heading Accession and Version