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pdxH pyridoxamine 5'-phosphate oxidase [ Bradyrhizobium ottawaense ]

Gene ID: 92968946, updated on 27-Aug-2024

Summary

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Gene symbol
pdxH
Gene description
pyridoxamine 5'-phosphate oxidase
Locus tag
CIT37_RS29860
Gene type
protein coding
Organism
Bradyrhizobium ottawaense (strain: OO99, nat-host: Glycine max cv. AC Orford, culture-collection: HAMBI:3284, culture-collection: LMG:26769, type-material: type strain of Bradyrhizobium ottawaense)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium
Old locus tag
CIT37_40455
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Genomic context

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NZ_CP029425.2Genomic Context describing neighboring genes Neighboring gene DnaJ C-terminal domain-containing protein Neighboring gene RT0821/Lpp0805 family surface protein Neighboring gene SDR family NAD(P)-dependent oxidoreductase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP029425.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression, purification, and characterization of recombinant Escherichia coli pyridoxine 5'-phosphate oxidase. Di Salvo M, et al. Protein Expr Purif, 1998 Aug. PMID 9693059
  2. Complete Genome Sequence of Bradyrhizobium ottawaense OO99(T), an Efficient Nitrogen-Fixing Symbiont of Soybean. Nguyen HDT, et al. Microbiol Resour Announc, 2018 Nov. PMID 30533842, Free PMC Article
  3. Soybeans inoculated with root zone soils of Canadian native legumes harbour diverse and novel Bradyrhizobium spp. that possess agricultural potential. Bromfield ESP, et al. Syst Appl Microbiol, 2017 Oct. PMID 28869059
  4. Bradyrhizobium ottawaense sp. nov., a symbiotic nitrogen fixing bacterium from root nodules of soybeans in Canada. Yu X, et al. Int J Syst Evol Microbiol, 2014 Sep. PMID 24969302, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
pyridoxamine 5'-phosphate oxidase
WP_018322567.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP029425.2 Reference assembly

    Range
    6302624..6303265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_018322567.1 MULTISPECIES: pyridoxamine 5'-phosphate oxidase [Bradyrhizobium]

    UniProtKB/TrEMBL
    A0A1I4XT12, A0A2U8PIZ2, A0A5H2YVP2, A0A7W6T6E8, A0A7W6TXB1, A0A7Y9RJ98, A0A840H3D1
Nucleotide Protein
Heading Accession and Version