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LOC9300533 probable L-gulonolactone oxidase 1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9300533, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9300533
Gene description
probable L-gulonolactone oxidase 1
Locus tag
ARALYDRAFT_685275
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9300533 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (17571777..17574493)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene putative FBD-associated F-box protein At3g50710 Neighboring gene putative FBD-associated F-box protein At3g50710 Neighboring gene probable serine/threonine-protein kinase PBL16 Neighboring gene uncharacterized LOC9300534 Neighboring gene chaperonin 60 subunit beta 3, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-arabinono-1,4-lactone oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable L-gulonolactone oxidase 1
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    17571777..17574493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002864411.2 → XP_002864457.1  probable L-gulonolactone oxidase 1

    See identical proteins and their annotated locations for XP_002864457.1

    UniProtKB/TrEMBL
    D7MLS3
    Conserved Domains (3) summary
    TIGR01677
    Location:19 → 573
    pln_FAD_oxido; plant-specific FAD-dependent oxidoreductase
    pfam01565
    Location:50 → 186
    FAD_binding_4; FAD binding domain
    cl21623
    Location:334 → 577
    ALO; D-arabinono-1,4-lactone oxidase
Nucleotide Protein
Heading Accession and Version

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