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cspD cold-shock protein CspD [ Bacillus tropicus ]

Gene ID: 93006229, updated on 3-Dec-2024

Summary

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Gene symbol
cspD
Gene description
cold-shock protein CspD
Locus tag
P3F89_RS02990
Gene type
protein coding
Organism
Bacillus tropicus (strain: T36S-23)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group
Old locus tag
P3F89_02990
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Genomic context

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NZ_CP119875.1Genomic Context describing neighboring genes Neighboring gene MerR family transcriptional regulator Neighboring gene TIGR00266 family protein Neighboring gene yteA family sporulation protein Neighboring gene 1,4-dihydroxy-2-naphthoate polyprenyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP119875.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The family of cold shock proteins of Bacillus subtilis. Stability and dynamics in vitro and in vivo. Schindler T, et al. J Biol Chem, 1999 Feb 5. PMID 9920884
  2. Cold shock stress-induced proteins in Bacillus subtilis. Graumann P, et al. J Bacteriol, 1996 Aug. PMID 8755892, Free PMC Article
  3. Whole-genome sequencing, genome mining, metabolic reconstruction and evolution of pentachlorophenol and other xenobiotic degradation pathways in Bacillus tropicus strain AOA-CPS1. Aregbesola OA, et al. Funct Integr Genomics, 2021 Mar. PMID 33547987

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cold-shock protein CspD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP119875.1 Reference assembly

    Range
    583148..583348
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_001193054.1 MULTISPECIES: cold-shock protein CspD [Bacillus]

    See identical proteins and their annotated locations for WP_001193054.1

    UniProtKB/Swiss-Prot
    Q6HRP0, Q6KL07, Q816H3, Q81K90
    UniProtKB/TrEMBL
    A0A063CL80, A0A090YZT1, A0A158RG69, A0A1H3LDQ9, A0A1J9UFR2, A0A1J9XRX7, A0A1J9Y4V6, A0A242W4H4, A0A243AXR0, A0A243CM02, A0A243J0A8, A0A2A7E2F1, A0A2A7GX35, A0A2A8V4Z0, A0A2B4FNJ4, A0A2G6QC41, A0A2N1K5T5, A0A3D1QQM1, A0A3G5UFW9, A0A4S4HGL8, A0A4Y6F080, A0A4Y7QQJ2, A0A516QYC2, A0A5C5AIG5, A0A6H9IPY3, A0A6L7GWV6, A0A7V7HFM5, A0A853XA36, A0A8T9Z4Q5, A0A9Q5X1J5, A0A9W3KXW3, A0A9W3ZZ04, A0A9W5E452, A0A9W5KQ49, A0A9W5KU91, A0A9W5NNN0, A0A9W5PRD2, A0A9W5QBW5, A0A9W5R2T6, A0A9W5V6J6, A0A9X0FD72, A0A9X6F3I5, A0A9X6FZ71, A0A9X6IN82, A0A9X6ME96, A0A9X6N9F7, A0A9X6NW52, A0A9X6PPN7, A0A9X6QKC8, A0AA91ZS01, A0AA96PQV3, A0AAE4QCW4, A0AAE6R170, A0AAI9RIW2, A0AAJ1LPR5, A0AAJ2VPP2, A0AAN0SVT7, A0AAU0QVP9, A0AAW5XDA6, A0AAW5XS40, A0AAW5Y3Z2, A0AAW5YH57, A0AAW8C6G5, A0AAW8IUA1, A0AAX0CDB1, A0AAX1SS60, A0AAX2G2U7, A0RK80, B7HBB8, B7HTX1, B7JDE3, B9J2G0, C3GQP7, Q632H8, Q6HC22, Q72YK2, Q83XH2, W8YAG9
Nucleotide Protein
Heading Accession and Version