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tssK type VI secretion system baseplate subunit TssK [ Burkholderia ambifaria AMMD ]

Gene ID: 93086480, updated on 27-Aug-2024

Summary

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Gene symbol
tssK
Gene description
type VI secretion system baseplate subunit TssK
Locus tag
CH72_RS17700
Gene type
protein coding
Organism
Burkholderia ambifaria AMMD (strain: AMMD, culture-collection: ATCC:BAA-244, type-material: type strain of Burkholderia ambifaria)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
Old locus tag
CH72_3519
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Genomic context

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Location:
chromosome: 2

2 - NZ_CP009799.1Genomic Context describing neighboring genes Neighboring gene Hcp family type VI secretion system effector Neighboring gene type VI secretion system lipoprotein TssJ Neighboring gene type VI secretion system Vgr family protein Neighboring gene DUF4123 domain-containing protein Neighboring gene T6SS effector BTH_I2691 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP009799.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. Nguyen VS, et al. Nat Microbiol, 2017 Jun 26. PMID 28650463
  2. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
  3. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article
  4. Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931592, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type VI secretion system baseplate subunit TssK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP009799.1 Reference assembly

    Range
    262219..263562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011658502.1 type VI secretion system baseplate subunit TssK [Burkholderia ambifaria]

    See identical proteins and their annotated locations for WP_011658502.1

    UniProtKB/TrEMBL
    B1T6U4, Q0B9Z1
Nucleotide Protein
Heading Accession and Version