U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9309739 putative glucose-6-phosphate 1-epimerase [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9309739, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9309739
Gene description
putative glucose-6-phosphate 1-epimerase
Locus tag
ARALYDRAFT_909417
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9309739 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (5854258..5857199, complement)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene SUPPRESSOR OF GAMMA RESPONSE 1 Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene U-box domain-containing protein 3 Neighboring gene pescadillo homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative glucose-6-phosphate 1-epimerase
Names
aldose 1-epimerase family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    5854258..5857199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002873625.2 → XP_002873671.1  putative glucose-6-phosphate 1-epimerase

    See identical proteins and their annotated locations for XP_002873671.1

    UniProtKB/TrEMBL
    D7M6K2
    Conserved Domains (1) summary
    cd09020
    Location:14 → 285
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials