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LOC9311118 probable mitochondrial import inner membrane translocase subunit TIM21 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9311118, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9311118
Gene description
probable mitochondrial import inner membrane translocase subunit TIM21
Locus tag
ARALYDRAFT_912250
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9311118 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (25073244..25075609)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene transcription factor UNE10 Neighboring gene type III polyketide synthase C Neighboring gene probable plastid-lipid-associated protein 11 Neighboring gene actin-related protein 2/3 complex subunit 5A Neighboring gene uncharacterized LOC110227687 Neighboring gene cationic amino acid transporter 9, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein import into mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TIM23 mitochondrial import inner membrane translocase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable mitochondrial import inner membrane translocase subunit TIM21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    25073244..25075609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021022873.1 → XP_020878532.1  probable mitochondrial import inner membrane translocase subunit TIM21

    UniProtKB/TrEMBL
    D7M6B7
    Conserved Domains (1) summary
    cl21648
    Location:163 → 264
    Coa1; Cytochrome oxidase complex assembly protein 1
Nucleotide Protein
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