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thpR RNA 2',3'-cyclic phosphodiesterase [ Bordetella parapertussis ]

Gene ID: 93206666, updated on 10-Dec-2024

Summary

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Gene symbol
thpR
Gene description
RNA 2',3'-cyclic phosphodiesterase
Locus tag
LK409_RS22585
Gene type
protein coding
Organism
Bordetella parapertussis (strain: FDAARGOS_1541, culture-collection: DSM:13415, type-material: type strain of Bordetella parapertussis)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Old locus tag
LK409_22585
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Genomic context

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NZ_CP085971.1Genomic Context describing neighboring genes Neighboring gene NAD(P)H-dependent oxidoreductase Neighboring gene 5'-3'-deoxyribonucleotidase Neighboring gene efflux transporter outer membrane subunit Neighboring gene efflux RND transporter permease subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP085971.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of the 2'-5' RNA ligase from Thermus thermophilus HB8. Kato M, et al. J Mol Biol, 2003 Jun 20. PMID 12798681
  2. The 2'-5' RNA ligase of Escherichia coli. Purification, cloning, and genomic disruption. Arn EA, et al. J Biol Chem, 1996 Dec 6. PMID 8940112
  3. Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens. Weigand MR, et al. mSystems, 2019 Nov 19. PMID 31744907, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA 2',3'-cyclic phosphodiesterase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP085971.1 Reference assembly

    Range
    4767469..4768056 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003807724.1 MULTISPECIES: RNA 2',3'-cyclic phosphodiesterase [Bordetella]

    See identical proteins and their annotated locations for WP_003807724.1

    UniProtKB/TrEMBL
    A0A0C6P9W5, A0A0H3LH53, K0M829, Q7WC95
Nucleotide Protein
Heading Accession and Version