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trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL [ Staphylococcus capitis subsp. urealyticus ]

Gene ID: 93669170, updated on 25-Aug-2024

Summary

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Gene symbol
trmL
Gene description
tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
Locus tag
V6C80_RS04695
Gene type
protein coding
Organism
Staphylococcus capitis subsp. urealyticus (strain: DSM 6717, nat-host: Homo sapiens, sub-species: urealyticus, culture-collection: DSM:6717, type-material: type strain of Staphylococcus capitis subsp. urealyticus)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
Old locus tag
V6C80_04690
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Genomic context

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NZ_CP145258.1Genomic Context describing neighboring genes Neighboring gene ABC transporter substrate-binding protein/permease Neighboring gene amino acid ABC transporter ATP-binding protein Neighboring gene tRNA epoxyqueuosine(34) reductase QueG Neighboring gene 6-phosphogluconolactonase Neighboring gene SAS053 family DNA gyrase inhibitor

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP145258.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YibK is the 2'-O-methyltransferase TrmL that modifies the wobble nucleotide in Escherichia coli tRNA(Leu) isoacceptors. Benítez-Páez A, et al. RNA, 2010 Nov. PMID 20855540, Free PMC Article
  2. Structure of the YibK methyltransferase from Haemophilus influenzae (HI0766): a cofactor bound at a site formed by a knot. Lim K, et al. Proteins, 2003 Apr 1. PMID 12596263

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
WP_047796440.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP145258.1 Reference assembly

    Range
    965083..965553
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_047796440.1 MULTISPECIES: tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL [Staphylococcus]

    See identical proteins and their annotated locations for WP_047796440.1

Nucleotide Protein
Heading Accession and Version