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Rnase2a ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin) [ Mus musculus (house mouse) ]

Gene ID: 93726, updated on 27-Nov-2024

Summary

Official Symbol
Rnase2aprovided by MGI
Official Full Name
ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)provided by MGI
Primary source
MGI:MGI:1890465
See related
Ensembl:ENSMUSG00000047222 AllianceGenome:MGI:1890465
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ear11
Summary
Predicted to enable RNA nuclease activity and lipopolysaccharide binding activity. Predicted to be involved in chemotaxis; defense response to Gram-positive bacterium; and innate immune response in mucosa. Predicted to be active in extracellular space. Is expressed in submandibular gland primordium. Orthologous to several human genes including RNASE2 (ribonuclease A family member 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in stomach adult (RPKM 5.7), genital fat pad adult (RPKM 3.1) and 2 other tissues See more
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Genomic context

See Rnase2a in Genome Data Viewer
Location:
14 C1; 14 26.44 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (51492718..51493569, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (51255261..51256112, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_36668 Neighboring gene angiogenin, ribonuclease A family, member 2 Neighboring gene eosinophil-associated, ribonuclease A family, member 14 Neighboring gene STARR-seq mESC enhancer starr_36669 Neighboring gene STARR-seq mESC enhancer starr_36670 Neighboring gene RIKEN cDNA 4930597G03 gene Neighboring gene predicted gene 7106 Neighboring gene predicted gene, 36641

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA nuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA nuclease activity ISO
Inferred from Sequence Orthology
more info
 
enables RNA nuclease activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables lipopolysaccharide binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in chemotaxis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in defense response to Gram-positive bacterium IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in innate immune response in mucosa IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
non-secretory ribonuclease
Names
eosinophil-associated ribonuclease 11
eosinophil-associated, ribonuclease A family, member 11
NP_444343.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053113.2NP_444343.2  non-secretory ribonuclease precursor

    See identical proteins and their annotated locations for NP_444343.2

    Status: PROVISIONAL

    Source sequence(s)
    BC027557
    Consensus CDS
    CCDS27041.1
    UniProtKB/TrEMBL
    Q8K196, Q923L5
    Related
    ENSMUSP00000056418.7, ENSMUST00000061936.8
    Conserved Domains (1) summary
    pfam00074
    Location:30152
    RnaseA; Pancreatic ribonuclease

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    51492718..51493569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)