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cspD cold shock domain-containing protein CspD [ Shewanella algae ]

Gene ID: 93809509, updated on 3-Dec-2024

Summary

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Gene symbol
cspD
Gene description
cold shock domain-containing protein CspD
Locus tag
E1N14_RS12325
Gene type
protein coding
Organism
Shewanella algae (strain: CECT-5071, nat-host: Jania sp. (Red alga), culture-collection: CECT:5071, type-material: type strain of Shewanella algae)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
Old locus tag
E1N14_012330
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Genomic context

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NZ_CP068230.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent Clp protease ATP-binding subunit ClpA Neighboring gene ATP-dependent Clp protease adapter ClpS Neighboring gene NADP-dependent isocitrate dehydrogenase Neighboring gene pseudouridine synthase Neighboring gene NUDIX hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP068230.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CspD, a novel DNA replication inhibitor induced during the stationary phase in Escherichia coli. Yamanaka K, et al. Mol Microbiol, 2001 Mar. PMID 11260474
  2. Complete genome sequence of Shewanella algae strain 2NE11, a decolorizing bacterium isolated from industrial effluent in Peru. Lizárraga WC, et al. Biotechnol Rep (Amst), 2022 Mar. PMID 35145887, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cold shock domain-containing protein CspD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP068230.1 Reference assembly

    Range
    2761013..2761219
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_025011178.1 MULTISPECIES: cold shock domain-containing protein CspD [Shewanella]

    UniProtKB/TrEMBL
    A0A1S2TX75, A0A6G7LRP0, A0AAU6V8L8, A0AAU6VY50
Nucleotide Protein
Heading Accession and Version