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ybaK Cys-tRNA(Pro) deacylase [ Roseomonas mucosa ]

Gene ID: 93870541, updated on 17-Dec-2024

Summary

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Gene symbol
ybaK
Gene description
Cys-tRNA(Pro) deacylase
Locus tag
DYH92_RS12995
Gene type
protein coding
Organism
Roseomonas mucosa (strain: NCTC13291, serovar: not available: to be reported later, type-material: type strain of Roseomonas mucosa)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Acetobacterales; Roseomonadaceae; Roseomonas
Old locus tag
NCTC13291_02628
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Genomic context

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NZ_UGVN01000001.1Genomic Context describing neighboring genes Neighboring gene CarD family transcriptional regulator Neighboring gene ferredoxin FdxA Neighboring gene RNA-binding S4 domain-containing protein Neighboring gene helicase-related protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_UGVN01000001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Aminoacyl-tRNA substrate and enzyme backbone atoms contribute to translational quality control by YbaK. Kumar S, et al. J Phys Chem B, 2013 Apr 25. PMID 23185990, Free PMC Article
  2. An isolated class II aminoacyl-tRNA synthetase insertion domain is functional in amino acid editing. Wong FC, et al. J Biol Chem, 2003 Dec 26. PMID 14530268
  3. Cys-tRNA(Pro) editing by Haemophilus influenzae YbaK via a novel synthetase.YbaK.tRNA ternary complex. An S, et al. J Biol Chem, 2005 Oct 14. PMID 16087664
  4. Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications. Zhang H, et al. Proteins, 2000 Jul 1. PMID 10813833

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Cys-tRNA(Pro) deacylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_UGVN01000001.1 Reference assembly

    Range
    2923097..2923570 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_019461231.1 MULTISPECIES: Cys-tRNA(Pro) deacylase [Roseomonas]

    UniProtKB/TrEMBL
    A0A1Q2YXK7, A0A1S8D8L7, A0A2D2H4B8
Nucleotide Protein
Heading Accession and Version