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adeR transcriptional activator (AdeR-alanine) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938860, updated on 6-Oct-2023

Summary

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Gene symbol
adeR
Gene description
transcriptional activator (AdeR-alanine)
Locus tag
BSU_31920
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU31920
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Genomic context

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Sequence:
NC_000964.3 (3276955..3278223)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene ESX secretion system YukD protein Neighboring gene small WGX100 secreted protein (ESX-dependent secretion) Neighboring gene L-alanine dehydrogenase (NAD-dependent) Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AdeR, a PucR-type transcription factor, activates expression of L-alanine dehydrogenase and is required for sporulation of Bacillus subtilis. Lin TH, et al. J Bacteriol, 2012 Sep. PMID 22797752, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AdeR (formerly yukF) is a transcriptional activator which mediates ald expression in response to alanine availability and is important for normal sporulation in Bacillus subtilis.
    Title: AdeR, a PucR-type transcription factor, activates expression of L-alanine dehydrogenase and is required for sporulation of Bacillus subtilis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
transcriptional activator (AdeR-alanine)
NP_391070.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 22797752; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391070.2 transcriptional activator (AdeR-alanine) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391070.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IZA9
    Conserved Domains (1) summary
    COG2508
    Location:24 → 418
    PucR; DNA-binding transcriptional regulator, PucR family [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71073.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases