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rpoE RNA polymerase sigma factor RpoE [ Vibrio crassostreae ]

Gene ID: 93901143, updated on 14-Oct-2024

Summary

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Gene symbol
rpoE
Gene description
RNA polymerase sigma factor RpoE
Locus tag
OC193_RS13285
Gene type
protein coding
Organism
Vibrio crassostreae (strain: LMG 22240, culture-collection: BCCM/LMG:22240, type-material: type strain of Vibrio crassostreae)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
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Genomic context

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Location:
chromosome: 1

1 - NZ_AP025476.1Genomic Context describing neighboring genes Neighboring gene SoxR reducing system RseC family protein Neighboring gene sigma-E factor regulatory protein RseB Neighboring gene RseA family anti-sigma factor Neighboring gene L-aspartate oxidase Neighboring gene protein YgfX Neighboring gene succinate dehydrogenase assembly factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AP025476.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol, 2021 Dec 14. PMID 34905112

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA polymerase sigma factor RpoE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP025476.1 Reference assembly

    Range
    2994326..2994904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008223963.1 MULTISPECIES: RNA polymerase sigma factor RpoE [Vibrio]

    See identical proteins and their annotated locations for WP_008223963.1

    UniProtKB/TrEMBL
    A0A0L1LES6, A0A0T7D5D8, A0A0T7DA30, A0A0T7DWQ9, A0A0T7EB04, A0A1E5FNZ9, A0A1R3FGP8, A0A2N7HSF8, A0A2N7IU41, A0A4U1X3M3, A0A4U2ALB7, A0A5M9N963, A0A7V7TGA1, A0A7Y4CT76, A0A7Y7TBW8, A0A7Z1S1U3, A0AAN0LRX4, A5L7I4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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