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OC193_RS15105 EAL and HDOD domain-containing protein [ Vibrio crassostreae ]

Gene ID: 93901507, updated on 3-Dec-2024

Summary

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Gene symbol
OC193_RS15105
Gene description
EAL and HDOD domain-containing protein
Locus tag
OC193_RS15105
Gene type
protein coding
Organism
Vibrio crassostreae (strain: LMG 22240, culture-collection: BCCM/LMG:22240, type-material: type strain of Vibrio crassostreae)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
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Genomic context

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Location:
chromosome: 1

1 - NZ_AP025476.1Genomic Context describing neighboring genes Neighboring gene ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase Neighboring gene helix-turn-helix transcriptional regulator Neighboring gene homoserine/homoserine lactone efflux protein Neighboring gene alpha/beta fold hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AP025476.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases. Bellini D, et al. Sci Rep, 2017 Feb 10. PMID 28186120, Free PMC Article
  2. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Simm R, et al. Mol Microbiol, 2004 Aug. PMID 15306016
  3. Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases. Tchigvintsev A, et al. J Mol Biol, 2010 Sep 24. PMID 20691189, Free PMC Article
  4. Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol, 2021 Dec 14. PMID 34905112

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
EAL and HDOD domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP025476.1 Reference assembly

    Range
    3343745..3344965 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_048662873.1 MULTISPECIES: EAL and HDOD domain-containing protein [Vibrio]

    See identical proteins and their annotated locations for WP_048662873.1

    UniProtKB/TrEMBL
    A0A4U1WAQ5
Nucleotide Protein
Heading Accession and Version