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P6988_RS25930 type II toxin-antitoxin system Phd/YefM family antitoxin [ Vibrio coralliilyticus ]

Gene ID: 93945055, updated on 3-Dec-2024

Summary

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Gene symbol
P6988_RS25930
Gene description
type II toxin-antitoxin system Phd/YefM family antitoxin
Locus tag
P6988_RS25930
Gene type
protein coding
Organism
Vibrio coralliilyticus (strain: Rb102)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
P6988_25930
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Genomic context

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Location:
plasmid: unnamed1

NZ_CP120721.1Genomic Context describing neighboring genes Neighboring gene isoprenylcysteine carboxylmethyltransferase family protein Neighboring gene Crp/Fnr family transcriptional regulator Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene hypothetical protein Neighboring gene DUF6559 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP120721.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation. Garcia-Pino A, et al. Nat Chem Biol, 2016 Jul. PMID 27159580
  2. Corepression of the P1 addiction operon by Phd and Doc. Magnuson R, et al. J Bacteriol, 1998 Dec. PMID 9829946, Free PMC Article
  3. Doc of prophage P1 is inhibited by its antitoxin partner Phd through fold complementation. Garcia-Pino A, et al. J Biol Chem, 2008 Nov 7. PMID 18757857, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type II toxin-antitoxin system Phd/YefM family antitoxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP120721.1 Reference assembly

    Range
    201897..202145
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005377003.1 MULTISPECIES: type II toxin-antitoxin system Phd/YefM family antitoxin [Gammaproteobacteria]

    See identical proteins and their annotated locations for WP_005377003.1

    UniProtKB/TrEMBL
    A0A066UQ66, A0A0M0I6V5, A0A151JGD4, A0A1R3FJC0, A0A2A2MZ81, A0A2A9G0X8, A0A2I3C5B1, A0A2K7SQ67, A0A2L1XYJ1, A0A2N7IXB0, A0A2R9VKL0, A0A3A2I2L8, A0A426VTA5, A0A5P9BG30, A0A7V7NP65, A0A8I0T3T1, A0A916AVL9, A0AAN1KNU6, A0AAP8SYH4, A0AAQ3AZN5, A0AAU9Q1S4, A0AAW8GUZ6, A0AAW9BR08
Nucleotide Protein
Heading Accession and Version