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ter1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 9407016, updated on 11-Sep-2024

Summary

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Official Symbol
ter1
Primary source
PomBase:SPNCRNA.214
Locus tag
SPOM_SPNCRNA.214
Gene type
ncRNA
RNA name
lncRNA
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPNCRNA.884; SPNG585
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Genomic context

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See ter1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3084610..3086022, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Pep5/Vps11-like zinc finger domain-containing protein Neighboring gene transcription coactivator PC4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Lys Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Telomerase RNA stem terminus element affects template boundary element function, telomere sequence, and shelterin binding. Webb CJ, et al. Proc Natl Acad Sci U S A, 2015 Sep 8. PMID 26305931, Free PMC Article
  2. TER1, the RNA subunit of fission yeast telomerase. Leonardi J, et al. Nat Struct Mol Biol, 2008 Jan. PMID 18157152
  3. Identification and characterization of the Schizosaccharomyces pombe TER1 telomerase RNA. Webb CJ, et al. Nat Struct Mol Biol, 2008 Jan. PMID 18157149, Free PMC Article
  4. Schizosaccharomyces pombe Ccq1 and TER1 bind the 14-3-3-like domain of Est1, which promotes and stabilizes telomerase-telomere association. Webb CJ, et al. Genes Dev, 2012 Jan 1. PMID 22215813, Free PMC Article
  5. Quality-Control Mechanism for Telomerase RNA Folding in the Cell. Hu X, et al. Cell Rep, 2020 Dec 29. PMID 33378677

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. findings define the sequence of events that occur during telomerase RNA biogenesis and characterize roles for Sm and Lsm complexes as well as for the methylase Tgs1
    Title: Telomerase RNA biogenesis involves sequential binding by Sm and Lsm complexes.
  2. Data show that telomerase RNA, TER1 (telomerase RNA 1)contains a stem terminus element (STE), which is essential for telomere maintenance.
    Title: Telomerase RNA stem terminus element affects template boundary element function, telomere sequence, and shelterin binding.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables template for synthesis of G-rich strand of telomere DNA activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in telomere maintenance via telomerase EXP
Inferred from Experiment
more info
 PubMed 
involved_in telomere maintenance via telomerase IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
part_of telomerase catalytic core complex IDA
Inferred from Direct Assay
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3084610..3086022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_191507.1 RNA Sequence

    Status: PROVISIONAL

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Research Materials