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bidA dethiobiotin synthetase BidA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944927, updated on 3-Dec-2024

Summary

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Official Symbol
bidA
Official Full Name
dethiobiotin synthetase BidA
Primary source
ECOCYC:G6851
Locus tag
b1593
See related
ASAP:ABE-0005319
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1588; ynfK
Summary
YnfK is 50% identical to paralog BioD. [More information is available at EcoGene: EG13849].
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Genomic context

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Sequence:
NC_000913.3 (1666524..1667219, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative menaquinol dehydrogenase Neighboring gene redox enzyme maturation protein DmsD Neighboring gene putative chloride:H(+) antiporter ClcB Neighboring gene DNA-binding transcriptional repressor Mlc Neighboring gene putative DNA-binding transcriptional regulator YnfL

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth. Song X, et al. Mol Microbiol, 2021 Nov. PMID 34597430, Free PMC Article
  2. Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Dozois CM, et al. Proc Natl Acad Sci U S A, 2003 Jan 7. PMID 12506201, Free PMC Article
  3. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
  4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth.
    Title: A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
dethiobiotin synthetase BidA
NP_416110.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1666524..1667219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416110.4 dethiobiotin synthetase BidA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416110.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A828NVW0
    Conserved Domains (1) summary
    PRK12374
    Location:1 → 231
    PRK12374; ATP-dependent dethiobiotin synthetase BioD
Nucleotide Protein
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Gene LinkOut

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