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gfcC capsule biosynthesis GfcC family protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944978, updated on 3-Dec-2024

Summary

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Official Symbol
gfcC
Official Full Name
capsule biosynthesis GfcC family protein
Primary source
ECOCYC:G6506
Locus tag
b0985
See related
ASAP:ABE-0003321
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0976; ymcB
Summary
Function characterized in enteropathogenic Escherichia coli (EPEC). [More information is available at EcoGene: EG13730]. The operon encoding YmcD, YmcC, YmcB, YmcA, YzzZ, Etp, and Etk was characterized in the enteropathogenic Escherichia coli strain O127:H6. [More information is available at EcoCyc: G6506].
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Genomic context

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Sequence:
NC_000913.3 (1047945..1048691, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein-tyrosine kinase Etk Neighboring gene phosphotyrosine-protein phosphatase Etp Neighboring gene putative exopolysaccharide export lipoprotein GfcE Neighboring gene putative lipoprotein GfcD Neighboring gene lipoprotein GfcB Neighboring gene threonine-rich inner membrane protein GfcA Neighboring gene IS1 family protein InsA Neighboring gene IS1 family protein InsB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biosynthesis and assembly of capsular polysaccharides in Escherichia coli. Whitfield C. Annu Rev Biochem, 2006. PMID 16756484
  2. Identification of an Escherichia coli operon required for formation of the O-antigen capsule. Peleg A, et al. J Bacteriol, 2005 Aug. PMID 16030220, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
capsule biosynthesis GfcC family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1047945..1048691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415505.1 capsule biosynthesis GfcC family protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415505.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7CQI7
    Conserved Domains (1) summary
    pfam06251
    Location:22 → 247
    Caps_synth_GfcC; Capsule biosynthesis GfcC
Nucleotide Protein
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