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yahO DUF1471 domain-containing protein YahO [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944985, updated on 3-Dec-2024

Summary

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Official Symbol
yahO
Official Full Name
DUF1471 domain-containing protein YahO
Primary source
ECOCYC:G6194
Locus tag
b0329
See related
ASAP:ABE-0001130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0327
Summary
The first 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG13599]. Expression of yahO is dependent on S . [More information is available at EcoCyc: G6194].
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Genomic context

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Sequence:
NC_000913.3 (346484..346759)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YahM Neighboring gene putative amino acid exporter YahN Neighboring gene DNA-binding transcriptional dual regulator PrpR Neighboring gene 2-methylisocitrate lyase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium. Ibanez-Ruiz M, et al. J Bacteriol, 2000 Oct. PMID 11004173, Free PMC Article
  2. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. Lacour S, et al. J Bacteriol, 2004 Nov. PMID 15489429, Free PMC Article
  3. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE, et al. Electrophoresis, 1998 Apr. PMID 9588799
  4. Climbing the protein ladder. Dovichi NJ. Nat Biotechnol, 2004 Oct. PMID 15470461
  5. Protein sequencing by mass analysis of polypeptide ladders after controlled protein hydrolysis. Zhong H, et al. Nat Biotechnol, 2004 Oct. PMID 15361881

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within response to radiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF1471 domain-containing protein YahO

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    346484..346759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414863.1 DUF1471 domain-containing protein YahO [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414863.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A776QKH5
    Conserved Domains (1) summary
    PRK09929
    Location:1 → 91
    PRK09929; hypothetical protein; Provisional
Nucleotide Protein
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