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rhsD protein RhsD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945116, updated on 3-Dec-2024

Summary

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Official Symbol
rhsD
Official Full Name
protein RhsD
Primary source
ECOCYC:EG10849
Locus tag
b0497
See related
ASAP:ABE-0001724
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0491
Summary
UniProtKB prediction of 26 aa signal peptide is a probable false positive. [More information is available at EcoGene: EG10849]. There are five homologous rhs loci that encode hydrophilic proteins with repetitive sequence elements and divergent C-termini . [More information is available at EcoCyc: EG10849].
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Genomic context

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Sequence:
NC_000913.3 (523261..527541)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene NADP(+)-dependent aldehyde reductase YbbO Neighboring gene multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 Neighboring gene putative ABC transporter ATP-binding protein YbbA Neighboring gene putative ABC transporter membrane subunit YbbP Neighboring gene PF15631 family protein YbbC Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. rhs gene family of Escherichia coli K-12. Sadosky AB, et al. J Bacteriol, 1989 Feb. PMID 2644231, Free PMC Article
  2. A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome. Lin RJ, et al. J Mol Biol, 1984 Jul 25. PMID 6086936
  3. A stationary-phase-dependent viability block governed by two different polypeptides from the RhsA genetic element of Escherichia coli K-12. Vlazny DA, et al. J Bacteriol, 1995 Apr. PMID 7721712, Free PMC Article
  4. Correlation of Rhs elements with Escherichia coli population structure. Hill CW, et al. Genetics, 1995 Sep. PMID 8536964, Free PMC Article
  5. Structure of the rhsA locus from Escherichia coli K-12 and comparison of rhsA with other members of the rhs multigene family. Feulner G, et al. J Bacteriol, 1990 Jan. PMID 2403547, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to sulfur starvation IEP
Inferred from Expression Pattern
more info
 PubMed 

General protein information

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Preferred Names
protein RhsD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    523261..527541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415030.1 protein RhsD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415030.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895P232
    Conserved Domains (2) summary
    COG3209
    Location:540 → 1417
    RhsA; Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only]
    cl21497
    Location:1 → 29
    PAAR_like; proline-alanine-alanine-arginine (PAAR) repeat superfamily
Nucleotide Protein
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